FigTree vs Archaeopteryx

Struggling to choose between FigTree and Archaeopteryx? Both products offer unique advantages, making it a tough decision.

FigTree is a Science & Education solution with tags like phylogenetics, evolution, trees, visualization, biology, bioinformatics.

It boasts features such as Visualization of phylogenetic trees, Editing of tree node shape, color, size and line width, Support for large datasets, Export trees in various formats like PDF, SVG, PNG etc. and pros including Free and open source, User friendly interface, Cross-platform availability, Actively maintained and updated.

On the other hand, Archaeopteryx is a Science & Education product tagged with genome-browser, annotation-tool, genomics.

Its standout features include Visualize genomic data, Support for common file formats like FASTA, GenBank, GFF3, Annotation editing, Session sharing and collaboration, Dynamic zooming and navigation, Integrates with Galaxy for workflow management, and it shines with pros like Open source and free to use, Lightweight and easy to install, Active development community, Customizable and extensible via plugins, Cross-platform compatibility.

To help you make an informed decision, we've compiled a comprehensive comparison of these two products, delving into their features, pros, cons, pricing, and more. Get ready to explore the nuances that set them apart and determine which one is the perfect fit for your requirements.

FigTree

FigTree

FigTree is a free, open-source desktop application for drawing and viewing phylogenetic trees. It allows easy editing of basic tree aesthetics, such as node shape, color, size, and line width. It can export trees in a range of file formats for publishing and supports large datasets.

Categories:
phylogenetics evolution trees visualization biology bioinformatics

FigTree Features

  1. Visualization of phylogenetic trees
  2. Editing of tree node shape, color, size and line width
  3. Support for large datasets
  4. Export trees in various formats like PDF, SVG, PNG etc.

Pricing

  • Free
  • Open Source

Pros

Free and open source

User friendly interface

Cross-platform availability

Actively maintained and updated

Cons

Limited customization options compared to paid software

No built-in phylogenetic tree construction tools

Only supports Newick format for importing trees


Archaeopteryx

Archaeopteryx

Archaeopteryx is an open-source genome browser and annotation tool that allows users to visualize, manage, and analyze genomic datasets. It supports a range of common genomics file formats and provides features like dynamic zooming, metadata editing, and sharing sessions.

Categories:
genome-browser annotation-tool genomics

Archaeopteryx Features

  1. Visualize genomic data
  2. Support for common file formats like FASTA, GenBank, GFF3
  3. Annotation editing
  4. Session sharing and collaboration
  5. Dynamic zooming and navigation
  6. Integrates with Galaxy for workflow management

Pricing

  • Open Source

Pros

Open source and free to use

Lightweight and easy to install

Active development community

Customizable and extensible via plugins

Cross-platform compatibility

Cons

Limited built-in analysis tools compared to desktop genome browsers

Less scalable for very large datasets

Steeper learning curve than some alternatives