CodeOcean

CodeOcean

CodeOcean is a cloud-based platform that allows researchers to share, validate, and archive code associated with scientific publications. It enables computational reproducibility by packaging code with data and environment specifications.
CodeOcean image
reproducibility code-sharing cloud-platform

CodeOcean: Cloud-Based Code Sharing for Scientific Reproducibility

Cloud-based platform for researchers to share, validate, and archive code, ensuring computational reproducibility with data and environment specifications.

What is CodeOcean?

CodeOcean is a cloud-based platform designed to enable computational reproducibility and collaboration in science. It allows researchers to share, validate, and archive the code associated with their scientific publications in one centralized location.

Some key features of CodeOcean include:

  • Code capsules - Code, data, and computing environments are bundled together into portable and reproducible capsules for sharing.
  • Version control - Capsules are linked to repositories like GitHub or Bitbucket for version tracking.
  • Computational reproducibility - Other researchers can easily reproduce results by re-running the code in CodeOcean.
  • Collaboration - Researchers can work together on code in real-time with integrated IDEs and virtual machines.
  • Citations - Code capsules are assigned DOIs so they can be formally cited as research outputs.
  • Review process - Code can be peer reviewed as part of the publication process to validate reproducibility.

Overall, CodeOcean aims to promote transparency, reproducibility, collaboration and proper academic credit for code. This supports integrity and progress in computational research across many disciplines.

CodeOcean Features

Features

  1. Allows researchers to share code associated with publications
  2. Enables computational reproducibility by packaging code with data and environment specifications
  3. Provides version control and archiving for code
  4. Allows validation and execution of code in the cloud
  5. Integrates with journals and conferences for one-click code sharing

Pricing

  • Freemium
  • Subscription-Based

Pros

Promotes open science and reproducibility

Simplifies code sharing for researchers

Provides persistent links and DOIs for code

Allows code to be cited like publications

Reduces burden of sharing and archiving code

Cons

Limited free plan

Can be complex for non-programmers

Relies on Docker which has a learning curve

Not ideal for commercial/proprietary code

Hosted on cloud so requires internet connection


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