Networks.bio
Networks.bio is a software platform for building interactive network visualizations of biological data. It enables researchers to visually explore the relationships between genes, proteins, pathways, and diseases.
network-analysis
data-visualization
systems-biology
Networks.bio: Interactive Network Visualization
A software platform for building interactive network visualizations of biological data, enabling researchers to explore gene-protein-pathway-disease relationships
What is Networks.bio?
Networks.bio is an open-source, web-based application for visualizing biological networks and integrating experimental data. It allows researchers to easily create interactive visualizations of protein-protein interactions, gene regulatory networks, metabolic pathways, and more.
Some key features of Networks.bio include:
- Import network data from common file formats like SIF, GraphML, and XGMML
- Customize network layouts using force-directed, circular, and other algorithms
- Annotate nodes and edges with experimental data such as gene expression levels
- Dynamically filter networks based on data attributes
- Export publication-quality network images
- Share interactive network projects with collaborators
Networks.bio provides an intuitive graphical interface that does not require programming skills. It runs completely in a web browser, facilitating sharing and collaboration. The software is useful for gaining systems-level insights into omics data sets and generating hypotheses about biological mechanisms and dynamics.
Overall, Networks.bio enables bench biologists to harness the power of network visualization and analysis for their research.
Networks.bio Features
Features
- Interactive network visualization
- Support for various data types like genes, proteins, pathways, diseases
- Customizable network layouts
- Network analysis tools
- Collaboration features
Pricing
- Free
- Open Source
Pros
User-friendly interface
Powerful visualization capabilities
Integrates well with various data sources
Open source and free to use
Cons
Limited built-in statistical analysis
Steep learning curve for advanced features
Need programming skills for full customization
Official Links
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