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Biohunter

Biohunter is open-source software for analyzing biological network data and simulating network dynamics. It enables researchers to visualize, manipulate, and model biological networks to gain insights into complex systems biology research questions.

What is Biohunter?

Biohunter is an open-source software application designed specifically for the analysis and simulation of biological network data. It provides researchers with a user-friendly graphical interface to import, visualize, manipulate, and mathematically model biological networks maps in order to study complex systems biology research questions.

Some key features of Biohunter include:

  • Import and integration of network data from various common file formats
  • Interactive network graphs with customizable visual properties and layouts
  • Built-in analysis tools for computing network topology statistics
  • Network motif detection algorithms
  • Node degree and centrality distribution plots
  • Identification of network modules and clusters
  • Network randomization and permutation functions
  • Simulation engine to computationally model network behavior over time
  • Model parameter sweeping capabilities
  • Visual plotting of simulation results
  • Support for developing custom network analysis plug-ins
  • Scripting interface for automating workflows

By providing this extensive toolkit specialized for biological networks in one open-source platform, Biohunter enables systems biologists and bioinformaticians to gain important insights into the complex dynamics of biological systems mapped as interaction networks.

The Best Biohunter Alternatives

Top Apps like Biohunter

EndNote, Zotero, Mendeley, Academia.edu, Google Scholar, Qiqqa, PubMed.gov, Publish or Perish, EasyBib, Peerlibrary, Weava, Crossref, Web of Knowledge, Utopia Documents, Hubmed, Quertle, PubPharm are some alternatives to Biohunter.

EndNote

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Zotero

Zotero is a free, open-source reference management software that helps you collect, organize, cite, and share your research sources. It was created by the Center for History and New Media at George Mason University.Some of the key features of Zotero include:Capturing references from web pages with one clickOrganizing...

Mendeley

Mendeley is a popular free reference management software used by millions of researchers worldwide. It helps you build your own searchable library, organize and annotate your PDFs, generate citations and bibliographies, collaborate and network with other researchers online, and discover the latest research.Some key features of Mendeley:Cloud sync...

Academia.edu

Academia.edu is an American social networking website for academics. Academia.edu allows users to create profiles and upload papers, lecture notes, and book chapters which other users can view or download. The website also enables users to follow the research interests of other users to facilitate collaboration and new...

Google Scholar

Google Scholar is a free online academic database that indexes scholarly literature from a wide variety of sources. It includes peer-reviewed papers, theses, books, abstracts, and court opinions. Researchers can use Google Scholar to find academic literature across most scientific and scholarly disciplines.Some key features of Google Scholar include...

Qiqqa

Qiqqa is a free, cross-platform reference management software designed to help researchers and academics organize, manage, and cite their references. Developed by Cambridge-based company Digital Science, Qiqqa aims to provide an alternative to paid reference managers like EndNote or Mendeley.Some key features of Qiqqa include:Web browser integration to...

PubMed.gov

PubMed is a free search engine accessing primarily the MEDLINE database of references and abstracts on life sciences and biomedical topics. PubMed is developed and maintained by the National Center for Biotechnology Information (NCBI) as part of the Entrez suite of databases.PubMed comprises more than 30 million citations for biomedical...

Publish or Perish

Publish or Perish is a software program designed to help academics carry out citation analysis and quantify their academic impact based on data from Google Scholar. The program retrieves and analyzes academic citation data to provide useful statistics on journal articles, authors, publications, and journals.Key features of Publish or...

EasyBib

EasyBib is a free online bibliography and citation tool designed to help students create properly formatted bibliographies and cite sources accurately when writing research papers. It is very user-friendly and easy to use, making it ideal for high school or college-level writing assignments.Users simply enter the details of their...

Peerlibrary

Peerlibrary is an open-source digital library platform designed to help organizations create custom digital repositories for managing digital assets. It offers robust media ingestion, storage, search, and access capabilities to power digital archives and information networks.Some key features of Peerlibrary include:Flexible metadata schema - Customize descriptive fields and...

Weava

Weava is a cloud-based team collaboration platform that provides a central hub for teams to manage projects, share content, and collaborate. Its key features include:Document sharing and real-time co-editing - Weava allows teams to store documents centrally, share files securely, and collaborate on docs in real-time like Google Docs...

Crossref

Crossref is a not-for-profit membership organization for scholarly publishing, established in 2000. It aims to make research outputs easy to find, cite, link, and assess. Crossref provides services and infrastructure that enables researchers to easily find content relevant to their work, no matter where it is published. This allows seamless connections...

Web of Knowledge

Web of Knowledge is a powerful research platform that provides access to multiple databases of scholarly literature across a wide range of academic disciplines. It allows researchers to search for and analyze peer-reviewed articles, citations, patents, conference proceedings, and more from a single interface.Key features of Web of Knowledge...

Utopia Documents

Utopia Documents is a free and open-source word processor and text editor application. It offers basic yet powerful word processing capabilities for creating a variety of documents including letters, reports, articles, essays, and more.As an open-source application, Utopia Documents is completely free to download and use. It runs on...

Hubmed

Hubmed is a specialized medical search engine that indexes high-quality biomedical literature from sources like PubMed and clinical trial registries. It allows clinicians, medical researchers, and patients to search for abstracts and full-text articles from prestigious medical journals and clinical trials.Unlike regular search engines, Hubmed only indexes peer-reviewed medical...

Quertle

Quertle is a free, open source clone of the popular online word guessing game Wordle. It allows users to play unlimited Wordle-style word games with different rules and settings.Some key features of Quertle include:Ability to play an unlimited number of word guessing games, not just one per day...

PubPharm

PubPharm is a comprehensive pharmaceutical intelligence database that supports drug discovery, clinical development, partnering, licensing, and competitive intelligence efforts. It contains millions of records spanning publications, patents, deals, clinical trials, company profiles, targets, and more.Key features and benefits of PubPharm include:Access to over 26 million publication and patent records...