MOLOME

MOLOME

Molome is an open-source molecular modeling software for creating and analyzing molecular structures. It provides features for building molecules, visualizing them in 2D and 3D, running simulations and calculations, and generating reports.
MOLOME image
chemistry 3d-modeling molecular-simulation

Molome: Open-Source Molecular Modeling Software

An open-source software for creating and analyzing molecular structures, featuring 2D and 3D visualization, simulations, calculations, and report generation.

What is MOLOME?

Molome is an open-source software for molecular modeling and computational chemistry. It allows users to build molecular structures, visualize them in 2D and 3D representations, analyze geometric and electronic properties, run molecular dynamics and Monte Carlo simulations, and perform calculations using quantum mechanics and molecular mechanics methods.

Some of the key features of Molome include:

  • An intuitive graphical user interface for building molecules by sketching or importing structures
  • 2D editing and visualization tools like molecule editors and table views
  • High-quality 3D rendering with various visualization styles such as ball and stick, tubes, ribbons, surfaces, etc.
  • Support for common file formats like PDB, Mol2, SDF, Gaussian input/output, etc.
  • Built-in force fields and simulation engines for running molecular dynamics, docking calculations, and conformational searches
  • Quantum chemistry methods including Hartree-Fock, density functional theory, and semi-empirical models
  • Automated workflows and batch processing capabilities
  • Extensive analysis features for geometries, energies, electrostatics, spectra, etc.
  • Custom scripting interface for developing plugins and modules
  • Available for Linux, Windows and macOS under GNU GPL open-source license

Overall, Molome provides a complete platform for computational chemists, molecular modelers, and researchers for molecular visualization, analysis, simulation, and modeling work.

MOLOME Features

Features

  1. Molecular builder
  2. 2D and 3D visualization
  3. Molecular simulations and calculations
  4. Analysis and reporting tools

Pricing

  • Open Source

Pros

Free and open source

Cross-platform availability

Support for many file formats

Customizable and scriptable

Cons

Steep learning curve

Limited tutorials and documentation

Not as advanced as some commercial options


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