MVGEN
MVGEN is an open-source molecular viewer and editor for proteins and small molecules. It allows interactive visualization and basic editing of molecular structures.
molecular-viewer
molecular-editor
proteins
small-molecules
visualization
editing
MVGEN: Molecular Viewer & Editor
Open-source molecular viewer and editor for proteins and small molecules, offering interactive visualization and basic editing capabilities
What is MVGEN?
MVGEN is an open-source, cross-platform molecular viewer and editor developed by the University of Pittsburgh. It is designed primarily for visualization and basic editing of proteins, small molecules, and other common chemical structures used in biomedical research.
Key features of MVGEN include:
- Interactive 3D visualization of common chemical file formats like PDB, Mol2, SDF
- Basic editing tools for adding/removing atoms, editing bonds, merging structures, etc.
- Support for animations and trajectories
- Extensible architecture allowing customization and addition of new features
- Intuitive user interface for manipulating structures in an interactive 3D environment
- Available on Windows, Mac OS X, and Linux
While not as full-featured as commercial packages like PyMOL or Chimera, MVGEN provides user-friendly, open-source molecular visualization and basic editing tailored towards the needs of biomedical researchers and educators.
MVGEN Features
Features
- Visualization of proteins, small molecules, and other molecular structures
- Basic editing tools for molecules
- Support for common file formats like PDB, Mol2, SDF
- Scripting interface for automation and analysis
- Cross-platform (Windows, Mac, Linux)
Pricing
- Open Source
Pros
Free and open source
Intuitive user interface
Good performance for real-time visualization
Extensible via plugins and scripts
Cons
Limited built-in analysis tools compared to commercial packages
Steep learning curve for scripting and automation
Small user community and documentation
Official Links
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