GeneStudio
GeneStudio is a free, open-source desktop application for molecular biology and genetics research. It provides tools for sequence analysis, molecular modeling, phylogenetics, and more.
genetics
molecular-biology
phylogenetics
sequence-analysis
GeneStudio: Free Molecular Biology Desktop Application
Free open-source software for molecular biology and genetics research, offering tools for sequence analysis, molecular modeling, phylogenetics, and more.
What is GeneStudio?
GeneStudio is a free, open-source desktop application for molecular biology and genetics research. It provides a wide range of tools for DNA, RNA, and protein sequence analysis, including sequence alignment, motif finding, secondary structure prediction, phylogenetic tree building, 3D molecular modeling, and more.
Some key features of GeneStudio include:
- Sequence alignment using Clustal Omega, MUSCLE, MAFFT, and other popular algorithms
- Phylogenetic tree building tools such as PhyML, RAxML, MrBayes, and PhyloBayes
- Protein structure modeling via MODELLER and secondary structure prediction with PSIPRED
- A user-friendly graphical interface for designing workflows and visualizing results
- Support for standard file formats like FASTA, GenBank, PDB, etc.
- A plugin architecture for adding new tools and workflows
- Tools for primer design, restriction mapping, and other molecular biology applications
GeneStudio runs natively on Linux, Mac OSX, and Windows. All core tools are open-source and additional plugins can be installed from an online repository. An active user community provides support through forums and mailing lists.
GeneStudio Features
Features
- Sequence alignment and analysis
- Phylogenetic tree building
- Molecular modeling and simulation
- Primer design
- Plasmid mapping
- Data visualization
Pricing
- Free
- Open Source
Pros
Free and open source
User friendly graphical interface
Integrates many bioinformatics tools
Available on Windows, Mac and Linux
Cons
Limited customization compared to command line tools
Not as full-featured as paid alternatives
Some tools could use more options and parameters
Official Links
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