Benchling icon

Benchling

Benchling is a cloud-based platform for managing and sharing biological data. It allows researchers to design DNA, clone genes, and collaborate with team members, all within one software environment. Benchling streamlines workflows and centralizes data storage.

What is Benchling?

Benchling is a leading cloud-based software platform used by over 200,000 scientists for managing and sharing biological data. It provides an intuitive interface and powerful tools to help research teams design DNA, clone genes, sequence genomes, and analyze data from anywhere with an internet connection.

Key features of Benchling include:

  • Molecular biology toolkit - Design primers, construct plasmids, analyze sequencing results, and more.
  • Inventory management - Track samples and reagents across projects and share with colleagues.
  • Collaboration - Securely share projects, protocols, and data with internal and external partners.
  • Electronic lab notebook - Document experiments with rich text, files, and structured tables.
  • Templates and workflows - Standardize molecular biology protocols for consistency.
  • Integrations - Connect Benchling's API to instruments, ELNs, and data analysis tools.
  • Compliance - Meet regulatory requirements like 21 CFR Part 11 and ISO standards.

By centralizing sequence design, molecular biology, and collaboration into a single cloud platform, Benchling helps research teams save time, reduce errors, and speed up the biotechnology development lifecycle. Its intuitive interface makes complex workflows accessible to scientists from students to experienced PIs across industries like therapeutics, food science, industrial biotech, and more.

The Best Benchling Alternatives

Top Apps like Benchling

SnapGene Viewer, Chromas, BioEdit, Serial Cloner, Geneious, Vector NTI, 4peaks, DNADynamo, PDRAW32, CLC Main Workbench, CLC Genomics Workbench, MacVector, ApE - A plasmid Editor, Genome Compiler, Findings, PlasmaDNA, VectorFriends, Open Vector Editor Electron, GeneStudio, XPlasMap, BVTech Plasmid, SimVector, DNApy, Labstep are some alternatives to Benchling.

SnapGene Viewer

SnapGene Viewer is a free, standalone software application developed by GSL Biotech for visualizing and analyzing DNA sequences and genetic maps. It supports an extensive range of molecular biology file formats including GenBank, FASTA, ABI trace files, Vector NTI, DNA Star, ApE, and SnapGene files.Key features of SnapGene Viewer...

Chromas

Chromas is a free, open-source spectral analyzer plugin released in 2017. It is lightweight software designed to work as an audio effect plugin in digital audio workstations like Ableton Live, Logic Pro, FL Studio, Reaper, and more.With Chromas added to an audio track, it displays a colorful graphical representation of...

BioEdit

BioEdit is a versatile biological sequence alignment editor and analysis software for Windows. First released in 1997 by Tom Hall, BioEdit has become one of the most widely used bioinformatics tools for molecular biology research.Key features of BioEdit include:User-friendly graphical interface for editing and analyzing DNA, RNA, and protein...

Serial Cloner

Serial Cloner is a utility software used to generate valid license keys and serial numbers for various software programs and applications. It contains an extensive database of serial numbers and activation codes for hundreds of popular commercial, shareware, and freeware software titles.With Serial Cloner, users can easily generate working...

Geneious

Geneious is a commercial bioinformatics software platform developed by Biomatters for DNA, RNA, and protein sequence analysis and manipulation. It provides an intuitive graphical user interface and integrates multiple commonly used tools for genomics research.Some key features of Geneious include:Sequence alignment with both global and local algorithmsPhylogenetic tree...

Vector NTI

Vector NTI is a bioinformatics software package developed by Invitrogen for Windows, Mac, and Linux systems. It is used by molecular biologists, biochemists, and other life science researchers to manage, analyze, and visualize DNA, RNA, and protein sequencing data.Some key features of Vector NTI include:Sequence alignment tools for...

4peaks

4peaks is a free, cross-platform software tool designed for visualization and editing of chromatogram data from analytical chemistry instrumentation. It supports a wide variety of file formats from various chromatography systems including GC, HPLC, CE, etc.Key features of 4peaks include:Interactive visualization of chromatograms with zooming and panningManual integration...

DNADynamo

DNADynamo is a powerful DNA sequence design and optimization software tool developed by Blue Heron Biotech. It enables synthetic biologists and biological engineers to design novel DNA components and pathways such as promoters, transcription factors, genes, vectors, and more.Some key features of DNADynamo include:Intuitive drag-and-drop graphical user interface...

PDRAW32

PDRAW32 is a basic computer-aided design (CAD) software application used for 2D drafting and drawing as well as simple 3D modeling. It provides a range of tools and features for creating and editing technical drawings, floor plans, illustrations, schematics, and other graphics.Key features of PDRAW32 include:Intuitive user interface...

CLC Main Workbench

CLC Main Workbench is a user-friendly desktop application that serves as an integrated environment for analyzing and visualizing next-generation sequencing (NGS) data across a wide range of applications. It provides robust tools for de novo assembly, mapping reads to a reference, analyzing variations, differential expression for RNA-Seq, metagenomic analysis, and...

CLC Genomics Workbench

CLC Genomics Workbench is a powerful desktop program designed specifically for analyzing next-generation sequencing (NGS) data. It provides an intuitive graphical user interface to guide researchers through common workflows like mapping reads to a reference genome, identifying genomic variants, analyzing gene expression, and more.Some key features of CLC Genomics...

MacVector

MacVector is a well-established desktop application for molecular biology sequence analysis and molecular cloning. It has been developed over decades to provide researchers and scientists with an intuitive interface and powerful set of tools for working with DNA and protein sequences.Some key features and capabilities of MacVector include:Sequence...

ApE - A plasmid Editor

ApE (A Plasmid Editor) is a feature-rich software application for creating, viewing, editing, graphing, and analyzing DNA plasmid sequences. It is designed to be simple to use, yet powerful enough for the daily tasks of a molecular biologist.Some key features and capabilities of ApE include:Intuitive graphical user interface...

Genome Compiler

Genome Compiler is a web-based software platform aimed at automating the design, editing, and ordering of genetic material for research applications. It provides an intuitive graphical user interface that allows researchers to design plasmids, primers, gene fragments, and full gene synthesizes. Key features include: - Drag-and-drop DNA design workspace for...

Findings

Findings is a collaborative note-taking and knowledge management application designed for teams. It provides a flexible system to collect, organize and share information across projects.Some key features of Findings:Flexible notebooks allow you to organize notes, documents, web clips and other content into customizable workspaces.Full-text search helps you...

PlasmaDNA

PlasmaDNA is an advanced data lineage and metadata platform designed to help organizations better understand and govern their data assets. It automatically reverse engineers and maps out technical, business and operational metadata to create a searchable knowledge graph of all data flows and processes.Key capabilities include:Automated discovery of...

VectorFriends

VectorFriends is a powerful vector graphics editor and illustration software application targeted at artists, designers and illustrators. It provides professional-level tools for creating illustrations, diagrams, logos, charts and graphs using vectors.Some key features include:Intuitive user interface for easy drawing and shaping using vectorsSupport for layers and groups to...

Open Vector Editor Electron

Open Vector Editor Electron is a free, open source vector graphics editor for Windows, Mac and Linux operating systems. It is built using the Electron framework which allows creating cross-platform desktop applications using web technologies.The editor allows users to create and edit SVG vector images and icons. It has...

GeneStudio

GeneStudio is a free, open-source desktop application for molecular biology and genetics research. It provides a wide range of tools for DNA, RNA, and protein sequence analysis, including sequence alignment, motif finding, secondary structure prediction, phylogenetic tree building, 3D molecular modeling, and more.Some key features of GeneStudio include:Sequence...

XPlasMap

XPlasMap is a user-friendly, open-source software application designed specifically for visualizing and analyzing plasmid sequences. It offers an intuitive graphical interface that allows researchers to easily generate high-quality, publication-ready plasmid maps.Key features of XPlasMap include:Interactive plasmid map viewer with automatic annotation of common features like ORFs, rRNA operons...

BVTech Plasmid

BVTech Plasmid is a free, open-source software application designed specifically for working with plasmid DNA sequences and maps. It provides a user-friendly graphical interface that allows researchers, students, and educators to easily design, analyze, and share plasmid maps and sequences.With BVTech Plasmid, users can quickly draw circular or linear...

SimVector

SimVector is an artificial intelligence-powered semantic search and text analysis platform. It allows users to upload large collections of text documents such as research papers, news articles, product manuals, etc. and creates a semantic index that captures concepts, contextual meaning, and relationships between terms.Using advanced machine learning and neural...

DNApy

DNApy is an open-source Python library and command line tool for analyzing and visualizing genomic data. It provides a wide range of functionality for common tasks in bioinformatics and computational biology research.Some key features of DNApy include:Reading common file formats like FASTA, FASTQ, VCFSequence alignment using BLAST or...

Labstep

Labstep is a cloud-based electronic lab notebook (ELN) designed specifically for scientists in academic research environments to better organize their work and streamline research workflows. Labstep aims to replace traditional paper notebooks by allowing researchers to plan experiments, take notes, attach files, access everywhere, enable collaboration, ensure data integrity, and...