ProAlign

ProAlign

ProAlign is a multiple sequence alignment software tool used for aligning protein, RNA and DNA sequences. It employs advanced alignment algorithms for accurate alignment of both closely-related and divergent sequences.
Science & Education Bioinformatics
alignment sequences proteins rna dna
ProAlign alternatives ➤

ProAlign: Multiple Sequence Alignment Software Tool

Advanced sequence alignment software for protein, RNA, and DNA sequences, accurately aligning closely-related and divergent sequences with its multiple algorithm.

What is ProAlign?

ProAlign is an advanced multiple sequence alignment software designed specifically for aligning protein, RNA and DNA sequences. It employs powerful alignment algorithms, including ClustalW, MUSCLE, MAFFT, and Kalign to produce highly accurate sequence alignments.

One of the key features of ProAlign is its ability to align both closely-related and highly divergent sequences with a high degree of accuracy. This makes it well-suited to aligning homologous sequences across diverse taxonomic groups, which can be challenging for some other alignment tools.

In addition, ProAlign provides a user-friendly graphical interface for easy alignment parameter customization, and allows export of alignments into various formats for further analysis. It runs on Windows, Mac and Linux operating systems.

Some of the key benefits of using ProAlign include: 1) Advanced alignment algorithms for accurate alignments; 2) Ability to align divergent sequences across taxa; 3) Customizable alignment parameters; 4) Supported export formats for further analysis; 5) Intuitive graphical user interface.

Overall, ProAlign is an excellent choice for researchers and scientists who need robust, Publication-ready multiple sequence alignments, especially for highly divergent protein families and gene homologs across diverse taxonomic groups.

ProAlign Features

Features

  1. Uses advanced progressive alignment algorithms for accurate alignment
  2. Supports alignment of protein, RNA and DNA sequences
  3. Handles alignment of both closely-related and divergent sequences
  4. Provides multiple alignment methods to choose from
  5. Allows manual editing and refinement of alignments
  6. Can handle large sequence datasets
  7. Generates phylogenetic trees from aligned sequences
  8. Offers color-coded visualization of alignments
  9. Provides consensus sequence and conservation analysis
  10. Exports alignments in various formats

Pricing

  • Free
  • Academic
  • Commercial

Pros

Produces high-quality alignments

Very flexible alignment options

Intuitive graphical user interface

Powerful analysis features

Free academic use

Cons

Steep learning curve

Manual intervention often required for best results

Limited technical support

Expensive licensing for commercial use

Official Links

Official Website
https://www.ProalignSoftware.com

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