GeneVenn

GeneVenn

GeneVenn is a free web-based tool for visualizing the overlap and intersections between gene/transcript lists. It creates customizable Venn diagrams to show shared and unique genes between datasets. Useful for transcriptomic and genomic data analysis.
GeneVenn image
genomics transcriptomics venn-diagram data-visualization

GeneVenn: Visualize Gene Overlapss

GeneVenn is a free web-based tool for visualizing the overlap and intersections between gene/transcript lists. It creates customizable Venn diagrams to show shared and unique genes between datasets. Useful for transcriptomic and genomic data analysis.

What is GeneVenn?

GeneVenn is a free web-based application that generates Venn diagrams to visualize comparisons between gene/transcript lists or datasets. It allows users to easily upload lists of genes or transcripts and create customizable 2-way or 3-way Venn diagrams showing the overlaps and intersections between the datasets.

Some key features of GeneVenn include:

  • Supports upload of gene/transcript IDs from common model organisms like human, mouse, rat, etc.
  • Options to customize colors, labels, and appearance of the Venn diagrams
  • Displays counts of shared and unique genes/transcripts between datasets
  • Performs statistical analysis like hypergeometric testing
  • Allows exporting publication-ready Venn diagram images

As a web tool, GeneVenn does not require any downloads or installation and has an intuitive graphical interface. It is useful for genomic and transcriptomic data analysis projects needing to identify common and distinct gene sets between experimental comparisons, genetic backgrounds, treatments conditions, and more. The Venn visualization and statistical outputs make interpreting such complex comparisons much easier. Overall, GeneVenn simplifies the process of comparing gene lists and visualizing intersections across datasets.

GeneVenn Features

Features

  1. Creates Venn diagrams to visualize shared and unique genes between datasets
  2. Supports up to 6 datasets for comparison
  3. Customizable diagram colors and labels
  4. Can upload gene lists or enter genes manually
  5. Venn diagrams are downloadable as PNG images
  6. Links to external databases (Entrez, Ensembl, etc) for more gene info
  7. Has advanced options like case-sensitive gene name matching

Pricing

  • Free

Pros

Free to use

Simple and intuitive interface

No login required

Fast generation of Venn diagrams

High-quality downloadable image output

Useful for quick genomic data analysis and visualization

Cons

Limited to 6 datasets maximum

Minimal customization options for diagrams

Does not support advanced statistical comparisons

No ability to save or export analysis sessions


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